AI research-agent deep dive / Phase 5C

Memory And Registries

AEther Flow uses memory, registries, wiki notes, semantic extracts, and local retrieval surfaces to find source evidence quickly. Their purpose is navigation and orientation. They do not replace tracked source files, registry rows, or source authority.

Source-first memory and registry mapretrievalsource checkregistry row
Visual orientation only: the diagram shows memory routing attention to sources, not memory becoming a source of truth.

Authority and retrieval layers

Find with memory; verify with source.

The memory system is useful because it is not asked to be authority. It points readers and agents toward the tracked layer that owns the question.

Canonical science

Registered TeX

Physics and derivational claims live in registered TeX sources and their claim-boundary context, not in search mirrors or generated notes.

Control metadata

Registries

CSV registries carry routing, provenance, source-object hashes, generated-output tracking, and agent-queryable memory metadata.

Project guidance

Registered Markdown

README files, AGENTS guidance, role contracts, skill contracts, source specs, publication briefs, and design notes carry project-control guidance.

Retrieval layers

Wiki, semantic, local

Wiki notes, semantic extracts, Obsidian mirrors, SQLite indexes, and .local caches speed lookup but cannot override tracked source authority.

Query workflow

Memory preflight is a disciplined navigation step.

The pattern is two-stage: use memory status and targeted lookup to find likely evidence, then inspect the named canonical source or registry row before relying on it.

Status

Check freshness

Memory status and freshness warnings reveal retrieval drift. A warning is a maintenance signal, not a new source claim.

Lookup

Find likely paths

Targeted lookup or search helps locate object IDs, registry rows, prior tasks, or likely source paths without broadening the task.

Inspect

Open canonical sources

Any memory hit that affects routing, claim language, source selection, or project-control changes must be checked against source files or registry rows.

Receipt

Record evidence

New control transactions that use memory preflight record status, queries, returned IDs, inspected paths, registries, and hashes.

Freshness and drift

Stale retrieval is a maintenance signal, not authority.

Retrieval drift can matter operationally because it may hide current source evidence. It still does not change the source hierarchy or create a project-control claim.

Stale mirror

Refresh support layers

If a raw mirror, Obsidian note, semantic extract, or SQLite index lags tracked files, refresh retrieval layers and inspect the source directly.

Generated disagreement

Source wins

If a wiki note, generated HTML page, PDF, or public summary disagrees with registered source material, the derivative needs repair.

Validate-only

Check without writing

Validate-only commands can show generated-state problems, but they do not refresh stale derivatives or promote generated artifacts.

Local cache

Never cite as authority

.local prompts, previews, run caches, and local retrieval indexes are convenience state, not committed evidence or scientific authority.

Reader path

Read memory with workflow, roles, and source authority.

Memory and registries connect the AI workflow to source evidence: workflow says when memory is used, roles and skills say who may use it, and source authority says what must be inspected before claims move.

Source authority

What this page can and cannot establish.

This page can orient readers to source-first memory, registry rows, wiki notes, semantic extracts, Obsidian mirrors, SQLite indexes, and local caches. It cannot change memory behavior, change registry schema, override tracked files, promote generated derivatives, or establish physics or workflow authority.